PUBLICATIONS

2023:

34. Bourbonnais, A., Chang, B. X., Sonnerup, R., Doney, S., Altabet, M. A. (2023). Marine N2O cycling from high spatial resolution concentration, stable isotopic and isotopomer measurements along a meridional transect in the eastern Pacific Ocean. Frontiers in Marine Science, 10, 671, doi: 10.3389/fmars.2023.1137064.

 

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2022:

33. Lazo-Murphy*, B. M., Larson, S., Staines, S., Bruck, H., McHenry, J., Bourbonnais, A., & Peng, X. (2022). Nitrous oxide production and isotopomer composition by fungi isolated from salt marsh sediments. Frontiers in Marine Science, 9, 2645, doi: 10.3389/fmars.2022.1098508. 

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32. Mashifane, T. B., Bourbonnais, A., & Fawcett, S. E. (2022). Nitrous oxide dynamics in the southern Benguela upwelling system. Journal of Geophysical Research: Oceans, 127(11), e2022JC019129.

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31. Bif, M. B., Bourbonnais, A., Hansell, D. A., Granger, J., Westbrook*, H., & Altabet, M. A. (2022). Controls on surface distributions of dissolved organic carbon and nitrogen in the southeast Pacific Ocean. Marine chemistry, 244, 104136.

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2021:

30. Izett, R. W., Hamme, R., McNeil, C., Manning, C., Bourbonnais, A., & Tortell, P. (2021). DO2/N2’ as a new tracer of marine net community production: Application and evaluation in the Subarctic Northeast Pacific and Canadian Arctic Ocean. Frontiers in Marine Science, 8:718625, doi: 10.3389/fmars.2021.718625.

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29. Bourbonnais, A., Frey, C., Sun, X., Bristow, L. A., Jayakumar, A., Ostrom, N. E., Casciotti, K. L., & Ward, B. B. (2021). Protocols for assessing transformation rates of nitrous oxide in the water column. Frontiers in Marine Science, 8:611937, doi:10.3389/fmars.2021.611937.

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2020:

28. Sayedi, S. S., Abbott, B. W., Thornton, B. F., Frederick, J., Vonk, J. E., Overduin, P., Schädel, C., Schuur, E. A. G., Bourbonnais, A., Demidov, N., Gavrilov, A., He, S., Hugelius, G., Jakobsson, M., Jones, M., Joung, D., Kraev, G., Macdonald, R. W., McGuire, A. D., Mu, C., O’Regan, M., Schreiner, K. M., Stranne, C., Pizhankova, E., Vasiliev, A., Westermann, S., Zarnetske, J. P., Zhang, T., Ghandehari, M., Baeumler, S., Brown, B. C., & Frei R. J. (2020). Subsea permafrost carbon stocks and climate change sensitivity estimated by expert assessment. Environmental Research Letters, 15, 124075. 

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27. Wilson, S. T., Al-Haj, A. N., Bourbonnais, A., Frey, C., Fulweiler, R. W., Kessler, J. D., Marchant, H. K., Milucka, J., Ray, N. E., Suntharalingam, P., Thornton, B. F., Upstill-Goddard, R. C., Weber, T. S., Arévalo-Martínez, D. L., Bange, H. W., Benway, H. M., Bianchi, D., Borges, A. V., Chang, B. X., Crill, P. M., del Valle, D. A., Farías, L., Joye, S. B., Tortell, P. D., Labidi, J., Manning, C. C., Pohlman, J. W., Rehder, G., Sparrow, K. J., Tortell, P. D., Treude, T., Valentine, D. L., Ward, B. B., Yang, S., and Yurganov, L. N. (2020). Ideas and perspectives: A strategic assessment of methane and nitrous oxide measurements in the marine environment. Biogeosciences, 17(22), 5809-5828.

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26. Yang, S., Chang, B. X., Warner, M. J., Weber, T. S., Bourbonnais, A., Santoro, A. E., ... & Bianchi, D. (2020). Global reconstruction reduces the uncertainty of oceanic nitrous oxide emissions and reveals a vigorous seasonal cycle. Proceedings of the National Academy of Sciences, 117(22), 11954-11960.

 

25. White, A. E., J. Granger, C. Selden, M. R. Gradoville, L. Potts, A. Bourbonnais, R. W. Fulweiler, A. N. Knapp, W. Mohr, P. H. Moisander, C. R. Tobias, M. Caffin, S. T. Wilson, M Benavides, S. Bonnet, M. R. Mulholland, B. X. Chang (2020), A critical review of the   N2 tracer method to measure diazotrophic production in pelagic ecosystems, Limnology and Oceanography Methods, doi: 10.1002/lom3.10353.

 

24. Moos,S. B., E. A. Boyle, M. A. Altabet, and A. Bourbonnais (2020), Investigating the cycling of chromium in the oxygen deficient waters of the Eastern Tropical North Pacific Ocean and the Santa Barbara Basin using stable isotopes, Marine Chemistry, 10.1016/j.marchem.2020.103756.

 

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2019:

23. Altabet, M. A., and A. Bourbonnais (2019), N-loss stoichiometry in a Peru ODZ eddy, Journal of Marine Research, 77(2), 169-189.

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22. Lehmann, N., Kienast, M., Granger, J., Bourbonnais, A., Altabet, M. A., and J-É. Tremblay, Remote western Arctic nutrients fuel remineralization in the deep Baffin Bay, submitted to Global Biogeochemical Cycles, November 2018, MS# 2018GB006134.

 

21. Dale, A., A. Bourbonnais, M. A. Altabet, K. Wallmann, and S. Sommer (2019), Isotopic fingerprints of benthic nitrogen cycling in the Peruvian oxygen minimum zone, Geochemica et Cosmochimica Acta, Accepted, manuscript #: GCA-D-18-00357.

 

2018:

20.  Fassbender, A., A. Bourbonnais, S. Clayton, P. Gaube, M. Omand, P. Franks, M. A. Altabet, and D. McGillicuddy, A mosaic of mechanisms: Interpreting physical-biogeochemical interactions at oceanic sub(mesoscales), EOS, Accepted, manuscript #:2018ES005647R.

 

19.  Reed, A., C. McNeil, E. D’Asaro, M. Altabet, A. Bourbonnais, and B. Johnson (2018), A gas tension device for the mesopelagic zone, Deep-Sea Research I, https://doi.org/10.1016/j.dsr.2018.07.007.

 

18.  Ganesh, S., A. B. Bertagnolli, L. A. Bristow, C. C. Padilla, N. Blackwood, M. Aldunate, A. Bourbonnais, M. A. Altabet, R. R. Malmstrom, T. Woyke, O. Ulloa, K. T. Konstantinidis, B. Thamdrup, and F. J. Stewart (2018), Genomic evidence for the use of alternative nitrogen substrates by anammox bacteria, The ISME Journal, https://doi.org/10.1038/s41396-018-0223-9.

 

17.  McNeil, C., E. D’Asaro, A. Reed, M. A. Altabet, A. Bourbonnais, and C. Beaverson (2018), Innovative Nitrogen Sensor Maps the North Pacific Oxygen Minimum Zone, Oceanography Supplement, 31, p. 96.

 

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2017:

16.  Wankel, S. D., A. Bourbonnais, and C. N. Charoenpong (2017), Microbial nitrogen cycling processes at submarine hydrothermal vents, In Kallmeyer, Jens and Wagner, Dirk (Ed.), Life in Extreme Environments, Life at Vents and Seeps, Volume 5, Berlin, Boston: De Gruyter, pp. 179-221.

 

15.  Bourbonnais, A., R. T. Letscher, H. W. Bange, V.  Échevin, J. Larkum, J. Mohn, N. Yoshida, and M. A. Altabet (2017), N2O production and consumption from stable isotopic and concentration data in the Peruvian coastal upwelling system, Global Biogeochemical Cycles, 31, doi:10.1002/2016GB005567.

 

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2016:

14.  Löscher, C. R., A. Bourbonnais, J. Dekaezemacker, C. N. Charoenpong, M. A. Altabet, H. W. Bange, R. Czeschel, C. Hoffmann, and R. A. Schmitz (2016), N2 fixation in eddies of the eastern tropical South Pacific Ocean, Biogeosciences, 13, 2889-2899.

 

13.  Dale, A, S. Sommer, U. Lomnitz, A. Bourbonnais, K. Wallmann (2016), Biological nitrate transport in sediments on the Peruvian margin mitigates benthic sulfide emissions and drives pelagic N loss during stagnation events, Deep-Sea Research Part I, 112, 123-136.

 

12.  Hu, H.*, A. Bourbonnais*, J. Larkum, H. W. Bange, and M. A. Altabet (2016), Nitrogen cycling in shallow low oxygen coastal waters off Peru from nitrite and nitrate nitrogen and oxygen isotopes, Biogeosciences, 13, 1453-1468.

*These authors contributed equally to this work.

 

11.  Padilla, C. C., L. A. Bristow, N. Sarode, E. Garcia-Robledo, E. Gómez Ramírez, C. R. Benson, A. Bourbonnais,  M. A. Altabet, P. R. Girguis, B. Thamdrup, F. J. Stewart (2016), NC10 bacteria in marine oxygen minimum zones, The ISME Journal, 10, 2067-2071.

 

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2015:

10.  Bourbonnais, A., M. A. Altabet, C. N. Charoenpong, J. Larkum, H. Hu, H. W. Bange, and L. Stramma (2015), N-loss isotope effects in the Peru oxygen minimum zone studied using a mesoscale eddy as a natural tracer experiment, Global Biogeochemical Cycles, 29, 793-811.

 

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2014:

9.  Bourbonnais, A., S. K. Juniper, D. A. Butterfield, R. E. Anderson, M. F. Lehmann (2014), Diversity and abundance of Bacteria and nirS-encoding denitrifiers associated with the Juan de Fuca Ridge hydrothermal system, Annals of Microbiology, 64, 1691–1705.

 

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2013:

8.  Bourbonnais, A., M. F. Lehmann, R. C. Hamme, C. C. Manning, S. K. Juniper (2013), Nitrate elimination and regeneration as evidenced by dissolved inorganic nitrogen isotopes in Saanich Inlet, a seasonally anoxic fjord, Marine Chemistry, 157, 194–207.

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7.  Wenk, C. B., J. Blees, J. Zopfi, M. Veronesi, A. Bourbonnais, C. J. Schubert, H. Niemann, M. F. Lehmann (2013), Anammox bacteria and sulfide-dependent denitrifiers co-exist in the water column of a meromictic south-alpine lake, Limnology and Oceanography, 58, 1–12.

 

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2012:

6.  Bourbonnais, A., S. K. Juniper, D. A. Butterfield, A. H. Devol, M. M. M. Kuypers, G. Lavik, S. J. Hallam, C. B. Wenk, B. X. Chang, S. A. Murdock, and M. F. Lehmann (2012b), Activity and abundance of denitrifying bacteria in the subsurface biosphere of diffuse hydrothermal vents of the Juan de Fuca Ridge, Biogeosciences, 9, 4661–4678.

 

5.  Bourbonnais, A., M. F. Lehmann, D. A. Butterfield, and S. K. Juniper (2012a), Subseafloor nitrogen transformations in diffuse hydrothermal vent fluids of the Juan de Fuca Ridge evidenced by the isotopic composition of nitrate and ammonium, Geochemistry Geophysics Geosystems, 13, Q02T01, doi:10.1029/2011GC003863.

 

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2010:

4.  Somes, C, A. Schmittner, E. D. Galbraith, M. F. Lehmann, M. A. Altabet, J. P. Montoya, R. M. Letelier, A. C. Mix, A. Bourbonnais, and M. Eby (2010), Simulating the global distribution of nitrogen isotopes in the Ocean, Global Biogeochemical Cycles, 24, GB4019, doi: 10.1029/2009GB003767.

 

3.  Manning, C. C, R. C. Hamme, and A. Bourbonnais (2010), Impact of deep-water renewal events on fixed nitrogen loss from seasonally-anoxic Saanich Inlet, Marine Chemistry, 122(1-4), 1–10, doi:10.1016/j.marchem.2010.08.002.

 

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2009:

2.  Bourbonnais, A., M. F. Lehmann, J. J. Waniek and D. E. Schultz-Bull (2009), Nitrate isotope anomalies as indicator of N2 fixation in the Azores Front region (subtropical N-E Atlantic), Journal of Geophysical Research, 114, C03003, doi:1029/2007JC004617.

 

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2008:

1.  Clark, I. D., R. Timlin, A. Bourbonnais, K. Jones, and K. Wickens (2008), Origin and fate of industrial ammonia in municipal groundwaters – tracing anaerobic oxidation (anammox) and apportionment with   N-NH4 , Ground Water Monitoring and Remediation, 28, 73–82.